MICdb3.0: a comprehensive resource of microsatellite repeats from prokaryotic genomes
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چکیده
منابع مشابه
MICdb3.0: a comprehensive resource of microsatellite repeats from prokaryotic genomes
The MICdb is a comprehensive relational database of perfect microsatellites extracted from completely sequenced and annotated genomes of bacteria and archaea. The current version MICdb3.0 is an updated and revised version of MICdb2.0. As compared with the previous version MICdb2.0, the current release is significantly improved in terms of much larger coverage of genomes, improved presentation o...
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The MICdb is a comprehensive relational database of perfect microsatellites extracted from completely sequenced and annotated genomes of bacteria and archaea. The current version MICdb3.0 is an updated and revised version of MICdb2.0. As compared with the previous version MICdb2.0, the current release is significantly improved in terms of much larger coverage of genomes, improved presentation o...
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1 Department of Information Science, Graduate School of Science, Hirosaki University, 3 Bunkyo-cho, Hirosaki 036-8561, Japan 2 Department of Electronic and Information System Engineering, Faculty of Science and Technology, Hirosaki University, 3 Bunkyo-cho, Hirosaki 036-8561, Japan 3 Graduate School of Mathematics, Nagoya University, Chikusa-ku, Nagoya 464-8602, Japan 4 Protonic NanoMachine Pro...
متن کاملShort-sequence DNA repeats in prokaryotic genomes.
Short-sequence DNA repeat (SSR) loci can be identified in all eukaryotic and many prokaryotic genomes. These loci harbor short or long stretches of repeated nucleotide sequence motifs. DNA sequence motifs in a single locus can be identical and/or heterogeneous. SSRs are encountered in many different branches of the prokaryote kingdom. They are found in genes encoding products as diverse as micr...
متن کاملSimple sequence repeats in prokaryotic genomes.
Simple sequence repeats (SSRs) in DNA sequences are composed of tandem iterations of short oligonucleotides and may have functional and/or structural properties that distinguish them from general DNA sequences. They are variable in length because of slip-strand mutations and may also affect local structure of the DNA molecule or the encoded proteins. Long SSRs (LSSRs) are common in eukaryotes b...
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ژورنال
عنوان ژورنال: Database
سال: 2014
ISSN: 1758-0463
DOI: 10.1093/database/bau005